All functions

S4BreaksMajor()

Major breaks for Vectors

S4BreaksMinor()

Minor breaks for Vectors

S4ExpandRange()

Range expansion

S4ForceFlat()

Force an vector to be flat

S4LabelFormat()

Format labels for S4 classes

S4Range()

Range of Values

S4Train()

Scale training

S4ZeroRange()

Check zero rang

S4_colour_scales

S4 colour scales

GreekSoldier() Nightfall() HelenOfTroy()

Hiding S4 objects as S3 vectors

WoodenHorse-vctr

WoodenHorse vctr methods

censorThis()

Censor any values outside of range

coord_S4()

Cartesian coordinates for S4 classes

discardOob()

Discard out of bounds values

example_genemodels()

Example gene models

fortify(<Vector>) fortify(<DataFrame>)

Fortification of S4 vectors

geom_genemodel()

Gene models

geom_range()

Ranges

ViewScaleS4

ggnomics extensions to ggplot2

guide_genomic_axis()

Axis for genomic positions

guide_ideogram_axis()

Ideogram axis guide

label_basepair() basepair_label()

Label numbers as basepairs with SI suffix

position_disjoint_ranges()

Segregrating overlapping ranges

scale_x_S4_continuous() scale_y_S4_continuous()

Position scales for S4 continuous data (x & y)

scale_x_S4_discrete() scale_y_S4_discrete()

Position scales for S4 discrete data (x & y)

scale_exontype_discrete()

Scales for exon types.

scale_x_genomic() scale_y_genomic()

Position scales for genomic data (x & y)

setup_ideograms()

Setup ideograms

squishThis()

Squish values into range

squish_infiniteThis()

Squish infinite values to range

stat_coverage()

Coverage