Scales for exon types. — scale_exontype

Displaying gene models take the convention that coding sequences (CDSs) are drawn thicker than untranslated regions (UTRs). This scale type maps names of exontypes to thickness values.

scale_exontype_discrete(
  ...,
  palette = NULL,
  aesthetics = "exontype",
  guide = "none"
)

Arguments

...	Arguments passed on to the S4 discrete scale
palette	A palette function that returns a named numerical vector that maps exon type names to widths.
aesthetics	The names of the aesthetics that this scale works with.
guide	A function used to create a guide or its name.

Value

A ScaleS4 object.

Details

This scale is typically used in conjunction with geom_genemodel.

By default, the following characters are recognised as CDSs: "CDS", "cds", and are drawn at 1x thickness. The following characters are recognised as UTRs: "UTR", "utr", "three_prime_UTR", "three_prime_utr", "five_prime_UTR", "five_prime_utr", and are drawn at 0.5x thickness.

Examples

NULL
#> NULL